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Changelog | |||||||||||||||||||||
Antimalware | |||||||||||||||||||||
Avast | ClamAV Updates | McAfee | Microsoft Security Essentials | ||||||||||||||||||
Applications | |||||||||||||||||||||
Bioconductor | The Comprehensive R Archive Network | Comprehensive TeX Archive Network | Cygwin | GIMP | |||||||||||||||||
GNOME: The Free Software Desktop Project | GNU Projects | GRASS GIS | Jenkins CI | KDE | |||||||||||||||||
LibreOffice | LyX | MySQL | Notepad++ | Openldap | |||||||||||||||||
Putty | Quantum GIS | Sage | Vim | VLC media player | |||||||||||||||||
WinSCP | Wireshark | XBMC | |||||||||||||||||||
Software Development Repositories | |||||||||||||||||||||
The Apache Software Foundation | Ananconda Channels | The Comprehensive Perl Archive Network | Eclipse Foundation Projects | PostgreSQL Extension Network | |||||||||||||||||
Python Package Index | |||||||||||||||||||||
Linux Distributions | |||||||||||||||||||||
Arch Linux | Bio-Linux | CentOS | CentOS AltArch | CentOS Vault | |||||||||||||||||
Debian | Fedora | Gentoo | Kali Linux | Knoppix | |||||||||||||||||
Linux Mint | openSUSE | Raspbian | Scientific Linux | Ubuntu | |||||||||||||||||
Linux Software Repositories | |||||||||||||||||||||
ATrpms | Bazel build tool | Bio-Linux Packages | Canonical Archive | Debian | |||||||||||||||||
ELRepo | Extra Packages for Enterprise Linux (EPEL) | Google Chrome | iRODS APT repos | IUS (Inline with Upstream Stable) Community Project | |||||||||||||||||
Kali Linux Packages | KDE Neon | LinuxMint Repository | LinuxMint Extra Repository | LizardFS APT repos | |||||||||||||||||
Mendeley | Packman | PostgreSQL | Puppet Labs | Rabbit MQ | |||||||||||||||||
RPM Fusion | Ubuntu Cloud Archive | Ubuntu LibreOffice PPA | Ubuntu OpenCPU PPA Repository | Ubuntu QGIS Repository | |||||||||||||||||
Ubuntu QGIS LTR Repository | Ubuntu QGIS PPA Repository | ||||||||||||||||||||
Other Operating Systems | |||||||||||||||||||||
FreeBSD | |||||||||||||||||||||
Other | |||||||||||||||||||||
Linux Kernel Sources | Gentoo Portage Tree | Macports Release Trunk | OpenVAS/Greenbone NVT Feed | OpenVAS/Greenbone SCAP Data Feed | |||||||||||||||||
OpenVAS/Greenbone CERT Data Feed | |||||||||||||||||||||
Data sets | |||||||||||||||||||||
Project Gutenberg | NCBI Blast | NCBI Genomes | NCBI Refseq | NCBI MMDB | |||||||||||||||||
RCSB PDB | SRTM3 | Swiss-Prot | UniProt | ||||||||||||||||||
Usage directions | |||||||||||||||||||||
The mirror is also available via the following protocols:
Run this script, with md5sum 3e31f2212fecf274e4cb8db1f8729afa, as root to enable the following distros and repos to update on campus:
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Install Tex Live using the following command: install-tl --location http://mirror.ufs.ac.za/ctan/systems/texlive/tlnet/ Install PyPI packages, from this mirror, by running pip with the following option: -i http://mirror.ufs.ac.za/pypi/simple and --trusted-host mirror.ufs.ac.za, or add index-url = http://mirror.ufs.ac.za/pypi/simple and trusted-host = mirror.ufs.ac.za to the global section of ~/.pip/pip.conf Install CRAN packages, from this mirror, by running the R function install.packages with the repos parameter specified, for example to install sp: install.packages(c("sp"), dependencies = TRUE, repos="http://mirror.ufs.ac.za/cran/") Make use of the R repos by creating the file
/etc/apt/sources.list.d/cran.list with the following
content, replace trusty with the correct release: Make use of the biolinux repos by creating the file
/etc/apt/sources.list.d/bio-linux.list with the following
content, replace trusty with the correct release: Make use of the QGIS repos by creating the file
/etc/apt/sources.list.d/qgis.list with the following
content, replace trusty with the correct release: Make use of the Mendeley repo by editing the file
/etc/apt/sources.list.d/mendeleydesktop.list by
changing: Make use of the KDE Neon repo by creating the file
/etc/apt/sources.list.d/neon.list with the following
contents: Install Bioconductor repo by running, thereafter follow
the bioconductor installation instructions: |